Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL158211.3-201ENST00000607385 239 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AL035456.1-201ENST00000456064 1369 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 AC097493.3-201ENST00000509725 367 ntBASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCC2Q8TAQ2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AC092127.1-201ENST00000567093 3455 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AC009090.5-201ENST00000624886 2285 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 BASP1P1-201ENST00000430708 665 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AL139010.1-201ENST00000454878 894 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 RN7SL828P-201ENST00000607615 303 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AL390754.1-201ENST00000619088 582 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AC073592.8-201ENST00000624126 511 ntBASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCC2Q8TAQ2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms