Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AL592424.1-201ENST00000563624 1536 ntBASIC13.85□□□□□ -0.19
BEST4Q8NFU0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 LINC01230-201ENST00000625222 3017 ntBASIC13.84□□□□□ -0.19
BEST4Q8NFU0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 PCED1CP-201ENST00000419887 785 ntBASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC132008.2-207ENST00000454517 770 ntBASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC139887.3-201ENST00000568585 713 ntBASIC13.84□□□□□ -0.19
BEST4Q8NFU0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 PGM5P2-202ENST00000637225 1043 ntBASIC13.84□□□□□ -0.19
BEST4Q8NFU0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
BEST4Q8NFU0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
BEST4Q8NFU0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 KRT16P4-201ENST00000453883 522 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 AC106795.1-205ENST00000512851 1056 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 MIR3180-1-201ENST00000580374 94 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 MIR3180-3-201ENST00000584616 94 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 AC005622.1-201ENST00000636801 1703 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms