Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF439Q8NDP4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SPCS2P4-201ENST00000436160 681 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 ALG1L5P-201ENST00000482043 771 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 KRT8P48-201ENST00000515599 1220 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 AC061975.2-201ENST00000581722 295 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 MTDHP5-201ENST00000598980 586 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 AC105917.1-201ENST00000506637 2539 ntBASIC13.26□□□□□ -0.29
ZNF439Q8NDP4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 MIR346-201ENST00000362234 95 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AP000347.1-202ENST00000435868 847 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SPDYE11-202ENST00000450699 704 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 AC079140.1-201ENST00000508039 487 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 LINC01225-203ENST00000563550 1244 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SPDYE9P-201ENST00000570642 692 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SPDYE10P-202ENST00000612005 668 ntBASIC13.25□□□□□ -0.29
ZNF439Q8NDP4 SPDYE8P-202ENST00000612377 668 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms