Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC149Q6ZUS6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC020907.1-201ENST00000616460 1350 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 INTS4P2-202ENST00000614726 2019 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC092933.1-201ENST00000393644 945 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 BCRP2-202ENST00000447763 634 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 BCRP6-201ENST00000510112 632 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 BCRP7-201ENST00000511549 544 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 PTP4A1P2-201ENST00000546033 454 ntBASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC149Q6ZUS6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
CCDC149Q6ZUS6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.64■□□□□ 0.26
CCDC149Q6ZUS6 AC005052.1-201ENST00000625181 2492 ntBASIC16.64■□□□□ 0.26
CCDC149Q6ZUS6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AC106886.4-201ENST00000623557 2502 ntBASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AC005229.1-201ENST00000392885 409 ntBASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AL355864.2-201ENST00000447420 863 ntBASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CSF2RBP1-201ENST00000447905 391 ntBASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AC068587.3-201ENST00000526613 355 ntBASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms