Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 AC136604.1-201ENST00000418535 575 ntBASIC17.93■□□□□ 0.46
SHC4Q6S5L8 KRT18P32-201ENST00000424695 1287 ntBASIC17.93■□□□□ 0.46
SHC4Q6S5L8 HIST3H2BA-201ENST00000436555 524 ntBASIC17.93■□□□□ 0.46
SHC4Q6S5L8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 AC018529.1-201ENST00000613063 361 ntBASIC17.93■□□□□ 0.46
SHC4Q6S5L8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SPDYE14P-201ENST00000442619 822 ntBASIC17.92■□□□□ 0.46
SHC4Q6S5L8 DNAJB3-201ENST00000446806 729 ntBASIC17.92■□□□□ 0.46
SHC4Q6S5L8 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 AC112482.1-201ENST00000492080 688 ntBASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 AL133215.2-201ENST00000609242 977 ntBASIC17.92■□□□□ 0.46
SHC4Q6S5L8 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 TCAF2P1-201ENST00000291129 2421 ntBASIC17.92■□□□□ 0.46
SHC4Q6S5L8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHC4Q6S5L8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHC4Q6S5L8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.9■□□□□ 0.46
SHC4Q6S5L8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHC4Q6S5L8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms