Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 COX5BP8-201ENST00000416911 349 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 TSSK5P-201ENST00000423978 907 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 AL353705.2-201ENST00000428243 662 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC022494.1-201ENST00000466044 728 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC009118.2-201ENST00000613275 655 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 SPDYE12P-201ENST00000618416 771 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TNRC18P2-201ENST00000417666 2714 ntBASIC16.73■□□□□ 0.27
RNF43Q68DV7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.73■□□□□ 0.27
RNF43Q68DV7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 AC105021.1-202ENST00000570572 669 ntBASIC16.73■□□□□ 0.27
RNF43Q68DV7 AC024267.1-201ENST00000582320 895 ntBASIC16.73■□□□□ 0.27
RNF43Q68DV7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 AC073592.8-201ENST00000624126 511 ntBASIC16.73■□□□□ 0.27
RNF43Q68DV7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF43Q68DV7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF43Q68DV7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 AC241585.1-201ENST00000433527 519 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 POU5F1P6-201ENST00000466990 990 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms