Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.28■□□□□ 0.04
VSX2P58304 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.28■□□□□ 0.04
VSX2P58304 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
VSX2P58304 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.28■□□□□ 0.04
VSX2P58304 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.28■□□□□ 0.04
VSX2P58304 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.28■□□□□ 0.04
VSX2P58304 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
VSX2P58304 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VSX2P58304 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VSX2P58304 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
VSX2P58304 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VSX2P58304 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 AC132872.4-202ENST00000622924 2756 ntBASIC15.27■□□□□ 0.04
VSX2P58304 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VSX2P58304 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.27■□□□□ 0.04
VSX2P58304 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.27■□□□□ 0.04
VSX2P58304 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VSX2P58304 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.27■□□□□ 0.04
VSX2P58304 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VSX2P58304 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 AC044860.1-202ENST00000559481 777 ntBASIC15.27■□□□□ 0.04
VSX2P58304 AC009407.1-201ENST00000568958 598 ntBASIC15.27■□□□□ 0.04
VSX2P58304 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.27■□□□□ 0.04
VSX2P58304 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.27■□□□□ 0.04
VSX2P58304 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.27■□□□□ 0.03
VSX2P58304 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.27■□□□□ 0.03
VSX2P58304 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.27■□□□□ 0.03
VSX2P58304 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.27■□□□□ 0.03
VSX2P58304 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VSX2P58304 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.26■□□□□ 0.03
VSX2P58304 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
VSX2P58304 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 FO393414.2-201ENST00000405153 598 ntBASIC15.26■□□□□ 0.03
VSX2P58304 AZGP1P1-201ENST00000411909 902 ntBASIC15.26■□□□□ 0.03
VSX2P58304 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.26■□□□□ 0.03
VSX2P58304 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 AC008738.7-201ENST00000609744 511 ntBASIC15.26■□□□□ 0.03
VSX2P58304 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms