Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.39□□□□□ -0.11
SUMO3P55854 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
SUMO3P55854 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.39□□□□□ -0.11
SUMO3P55854 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SUMO3P55854 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SUMO3P55854 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.38□□□□□ -0.11
SUMO3P55854 TSSK5P-201ENST00000423978 907 ntBASIC14.38□□□□□ -0.11
SUMO3P55854 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.38□□□□□ -0.11
SUMO3P55854 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.38□□□□□ -0.11
SUMO3P55854 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.38□□□□□ -0.11
SUMO3P55854 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SUMO3P55854 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.38□□□□□ -0.11
SUMO3P55854 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.38□□□□□ -0.11
SUMO3P55854 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
SUMO3P55854 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SUMO3P55854 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SUMO3P55854 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.37□□□□□ -0.11
SUMO3P55854 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SUMO3P55854 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.37□□□□□ -0.11
SUMO3P55854 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.37□□□□□ -0.11
SUMO3P55854 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SUMO3P55854 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.37□□□□□ -0.11
SUMO3P55854 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SUMO3P55854 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
SUMO3P55854 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.37□□□□□ -0.11
SUMO3P55854 AC009477.1-201ENST00000452936 217 ntBASIC14.37□□□□□ -0.11
SUMO3P55854 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.37□□□□□ -0.11
SUMO3P55854 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.37□□□□□ -0.11
SUMO3P55854 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SUMO3P55854 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SUMO3P55854 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUMO3P55854 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.36□□□□□ -0.11
SUMO3P55854 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUMO3P55854 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms