Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NUP98P52948 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.43■□□□□ 0.7
NUP98P52948 AL391280.1-201ENST00000506969 1062 ntBASIC19.43■□□□□ 0.7
NUP98P52948 AL603832.2-201ENST00000566195 2125 ntBASIC19.43■□□□□ 0.7
NUP98P52948 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.43■□□□□ 0.7
NUP98P52948 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP98P52948 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NUP98P52948 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP98P52948 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP98P52948 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 AC009090.5-201ENST00000624886 2285 ntBASIC19.42■□□□□ 0.7
NUP98P52948 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NUP98P52948 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 AL139094.1-201ENST00000405549 1188 ntBASIC19.42■□□□□ 0.7
NUP98P52948 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP98P52948 CALR4P-201ENST00000431943 946 ntBASIC19.42■□□□□ 0.7
NUP98P52948 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.42■□□□□ 0.7
NUP98P52948 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.42■□□□□ 0.7
NUP98P52948 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP98P52948 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP98P52948 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP98P52948 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP98P52948 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP98P52948 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP98P52948 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP98P52948 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP98P52948 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP98P52948 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.41■□□□□ 0.7
NUP98P52948 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP98P52948 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 AC091804.1-201ENST00000486888 567 ntBASIC19.41■□□□□ 0.7
NUP98P52948 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.41■□□□□ 0.7
NUP98P52948 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 SAMD11P1-201ENST00000571429 661 ntBASIC19.41■□□□□ 0.7
NUP98P52948 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.41■□□□□ 0.7
NUP98P52948 AL096828.3-201ENST00000615354 462 ntBASIC19.41■□□□□ 0.7
NUP98P52948 AC132938.4-201ENST00000623835 848 ntBASIC19.41■□□□□ 0.7
NUP98P52948 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP98P52948 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.41■□□□□ 0.7
NUP98P52948 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP98P52948 AC026471.1-201ENST00000564629 3026 ntBASIC19.41■□□□□ 0.7
NUP98P52948 LRRC59-203ENST00000576448 1531 ntBASIC19.4■□□□□ 0.7
NUP98P52948 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NUP98P52948 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NUP98P52948 BTBD6P1-201ENST00000412176 1267 ntBASIC19.4■□□□□ 0.7
NUP98P52948 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.4■□□□□ 0.7
NUP98P52948 MIR4741-201ENST00000579822 90 ntBASIC19.4■□□□□ 0.7
NUP98P52948 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.4■□□□□ 0.7
NUP98P52948 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms