Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC6A12P48065 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 AC112693.3-201ENST00000624819 1983 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 AL645939.2-201ENST00000427340 991 ntBASIC15.32■□□□□ 0.04
SLC6A12P48065 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC6A12P48065 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.32■□□□□ 0.04
SLC6A12P48065 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC6A12P48065 AC051619.7-201ENST00000568314 623 ntBASIC15.32■□□□□ 0.04
SLC6A12P48065 SPDYE12P-201ENST00000618416 771 ntBASIC15.32■□□□□ 0.04
SLC6A12P48065 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 TUBB3P1-201ENST00000405796 1332 ntBASIC15.32■□□□□ 0.04
SLC6A12P48065 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC6A12P48065 FO538757.1-201ENST00000623083 1397 ntBASIC15.32■□□□□ 0.04
SLC6A12P48065 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SLC6A12P48065 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A12P48065 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A12P48065 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC6A12P48065 AC074338.1-201ENST00000416825 156 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 AC025678.2-201ENST00000562061 970 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 AL138828.2-201ENST00000615812 383 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 AL033527.5-202ENST00000641632 1098 ntBASIC15.31■□□□□ 0.04
SLC6A12P48065 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC6A12P48065 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC6A12P48065 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC6A12P48065 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms