Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CD40P25942 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CD40P25942 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.71□□□□□ -0.22
CD40P25942 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40P25942 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
CD40P25942 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.71□□□□□ -0.22
CD40P25942 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.71□□□□□ -0.22
CD40P25942 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40P25942 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.71□□□□□ -0.22
CD40P25942 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD40P25942 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD40P25942 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD40P25942 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CD40P25942 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 AC126755.1-201ENST00000525846 6405 ntBASIC13.7□□□□□ -0.22
CD40P25942 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 KRT17P7-201ENST00000451704 1104 ntBASIC13.7□□□□□ -0.22
CD40P25942 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 HNRNPUP1-201ENST00000554987 333 ntBASIC13.7□□□□□ -0.22
CD40P25942 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.7□□□□□ -0.22
CD40P25942 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.7□□□□□ -0.22
CD40P25942 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD40P25942 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 AC063926.3-201ENST00000624734 5658 ntBASIC13.7□□□□□ -0.22
CD40P25942 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD40P25942 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40P25942 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD40P25942 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.69□□□□□ -0.22
CD40P25942 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 SLED1-202ENST00000512051 380 ntBASIC13.69□□□□□ -0.22
CD40P25942 AC104596.2-201ENST00000512793 793 ntBASIC13.69□□□□□ -0.22
CD40P25942 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.69□□□□□ -0.22
CD40P25942 WASH4P-201ENST00000564273 1246 ntBASIC13.69□□□□□ -0.22
CD40P25942 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40P25942 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40P25942 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40P25942 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms