Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
MMP8P22894 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP8P22894 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP8P22894 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
MMP8P22894 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MMP8P22894 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP8P22894 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 TARDBPP1-201ENST00000442013 1203 ntBASIC16.7■□□□□ 0.26
MMP8P22894 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP8P22894 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP8P22894 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP8P22894 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 SPDYE12P-201ENST00000618416 771 ntBASIC16.7■□□□□ 0.26
MMP8P22894 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.7■□□□□ 0.26
MMP8P22894 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP8P22894 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP8P22894 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MMP8P22894 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
MMP8P22894 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 FO538757.1-201ENST00000623083 1397 ntBASIC16.69■□□□□ 0.26
MMP8P22894 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 AC004449.1-201ENST00000564240 433 ntBASIC16.69■□□□□ 0.26
MMP8P22894 MIR6069-201ENST00000620069 79 ntBASIC16.69■□□□□ 0.26
MMP8P22894 AL033527.5-202ENST00000641632 1098 ntBASIC16.69■□□□□ 0.26
MMP8P22894 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms