Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX1P22670 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX1P22670 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX1P22670 AP000842.3-202ENST00000569238 1080 ntBASIC17.35■□□□□ 0.37
RFX1P22670 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RFX1P22670 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX1P22670 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RFX1P22670 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.34■□□□□ 0.37
RFX1P22670 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 MEIS3P1-201ENST00000495167 958 ntBASIC17.34■□□□□ 0.37
RFX1P22670 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.34■□□□□ 0.37
RFX1P22670 AC027369.6-201ENST00000525520 931 ntBASIC17.34■□□□□ 0.37
RFX1P22670 ALG1L8P-201ENST00000533887 760 ntBASIC17.34■□□□□ 0.37
RFX1P22670 AL596325.1-201ENST00000563991 1082 ntBASIC17.34■□□□□ 0.37
RFX1P22670 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 AC134407.2-201ENST00000625089 1978 ntBASIC17.34■□□□□ 0.37
RFX1P22670 AC084121.4-201ENST00000641598 221 ntBASIC17.34■□□□□ 0.37
RFX1P22670 AF228730.8-201ENST00000642140 221 ntBASIC17.34■□□□□ 0.37
RFX1P22670 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX1P22670 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX1P22670 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX1P22670 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.33■□□□□ 0.37
RFX1P22670 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RFX1P22670 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
RFX1P22670 AC022532.1-201ENST00000624563 1728 ntBASIC17.33■□□□□ 0.37
RFX1P22670 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RFX1P22670 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX1P22670 AL691432.1-201ENST00000596308 1422 ntBASIC17.33■□□□□ 0.36
RFX1P22670 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFX1P22670 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RFX1P22670 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.33■□□□□ 0.36
RFX1P22670 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.33■□□□□ 0.36
RFX1P22670 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX1P22670 NME2P1-201ENST00000426182 414 ntBASIC17.33■□□□□ 0.36
RFX1P22670 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
RFX1P22670 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX1P22670 LINC01225-203ENST00000563550 1244 ntBASIC17.33■□□□□ 0.36
RFX1P22670 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.33■□□□□ 0.36
RFX1P22670 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.33■□□□□ 0.36
RFX1P22670 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX1P22670 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX1P22670 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RFX1P22670 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFX1P22670 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX1P22670 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms