Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KCNA3P22001 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNA3P22001 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 AL008707.1-201ENST00000422498 534 ntBASIC19.2■□□□□ 0.66
KCNA3P22001 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.2■□□□□ 0.66
KCNA3P22001 Z97180.1-201ENST00000445173 988 ntBASIC19.2■□□□□ 0.66
KCNA3P22001 AC114812.1-204ENST00000449669 728 ntBASIC19.2■□□□□ 0.66
KCNA3P22001 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
KCNA3P22001 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.2■□□□□ 0.66
KCNA3P22001 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.2■□□□□ 0.66
KCNA3P22001 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
KCNA3P22001 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNA3P22001 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
KCNA3P22001 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA3P22001 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
KCNA3P22001 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 AC018892.3-201ENST00000623986 2499 ntBASIC19.19■□□□□ 0.66
KCNA3P22001 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNA3P22001 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
KCNA3P22001 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
KCNA3P22001 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KCNA3P22001 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNA3P22001 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KCNA3P22001 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
KCNA3P22001 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNA3P22001 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNA3P22001 AC114501.1-201ENST00000445949 172 ntBASIC19.19■□□□□ 0.66
KCNA3P22001 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.19■□□□□ 0.66
KCNA3P22001 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA3P22001 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KCNA3P22001 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 RNF216P1-203ENST00000404404 2427 ntBASIC19.18■□□□□ 0.66
KCNA3P22001 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 AL596276.2-201ENST00000447525 331 ntBASIC19.18■□□□□ 0.66
KCNA3P22001 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
KCNA3P22001 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KCNA3P22001 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.18■□□□□ 0.66
KCNA3P22001 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KCNA3P22001 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA3P22001 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KCNA3P22001 UBALD1-205ENST00000590891 2641 ntBASIC19.18■□□□□ 0.66
KCNA3P22001 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms