Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 KRT8P37-201ENST00000451609 1420 ntBASIC14.15□□□□□ -0.14
CTLA4P16410 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
CTLA4P16410 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.15□□□□□ -0.14
CTLA4P16410 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.15□□□□□ -0.14
CTLA4P16410 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.15□□□□□ -0.14
CTLA4P16410 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 AC026979.3-201ENST00000607315 403 ntBASIC14.15□□□□□ -0.14
CTLA4P16410 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.15□□□□□ -0.14
CTLA4P16410 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTLA4P16410 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTLA4P16410 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CTLA4P16410 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTLA4P16410 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTLA4P16410 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.14□□□□□ -0.15
CTLA4P16410 AC004461.1-201ENST00000412461 403 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 KRT18P32-201ENST00000424695 1287 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 FAM58DP-201ENST00000428076 619 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.14□□□□□ -0.15
CTLA4P16410 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 EEF1DP4-201ENST00000446006 880 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.14□□□□□ -0.15
CTLA4P16410 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.14□□□□□ -0.15
CTLA4P16410 AC093520.2-201ENST00000561830 333 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.14□□□□□ -0.15
CTLA4P16410 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.14□□□□□ -0.15
CTLA4P16410 AL450472.2-201ENST00000603663 1156 ntBASIC14.14□□□□□ -0.15
CTLA4P16410 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.14□□□□□ -0.15
CTLA4P16410 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.14□□□□□ -0.15
CTLA4P16410 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.14□□□□□ -0.15
CTLA4P16410 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTLA4P16410 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTLA4P16410 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.14□□□□□ -0.15
CTLA4P16410 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.13□□□□□ -0.15
CTLA4P16410 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTLA4P16410 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.13□□□□□ -0.15
CTLA4P16410 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTLA4P16410 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms