Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.74■□□□□ 0.43
RARBP10826 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.74■□□□□ 0.43
RARBP10826 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 AC106760.1-201ENST00000508690 800 ntBASIC17.74■□□□□ 0.43
RARBP10826 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RARBP10826 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.74■□□□□ 0.43
RARBP10826 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.74■□□□□ 0.43
RARBP10826 AC009542.2-202ENST00000619004 1067 ntBASIC17.74■□□□□ 0.43
RARBP10826 AC005252.2-201ENST00000624630 1141 ntBASIC17.74■□□□□ 0.43
RARBP10826 RHOXF1P1-202ENST00000635473 501 ntBASIC17.74■□□□□ 0.43
RARBP10826 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 MSTO2P-201ENST00000314835 1709 ntBASIC17.74■□□□□ 0.43
RARBP10826 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
RARBP10826 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
RARBP10826 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.74■□□□□ 0.43
RARBP10826 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.74■□□□□ 0.43
RARBP10826 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RARBP10826 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARBP10826 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RARBP10826 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.73■□□□□ 0.43
RARBP10826 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 AC046158.3-201ENST00000624947 2558 ntBASIC17.73■□□□□ 0.43
RARBP10826 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 C2orf27AP3-201ENST00000434123 579 ntBASIC17.73■□□□□ 0.43
RARBP10826 PHKG1P2-201ENST00000457537 863 ntBASIC17.73■□□□□ 0.43
RARBP10826 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.73■□□□□ 0.43
RARBP10826 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.73■□□□□ 0.43
RARBP10826 KRT90P-201ENST00000549264 1064 ntBASIC17.73■□□□□ 0.43
RARBP10826 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 AC244669.2-201ENST00000612320 853 ntBASIC17.73■□□□□ 0.43
RARBP10826 AL354718.3-201ENST00000616414 581 ntBASIC17.73■□□□□ 0.43
RARBP10826 CR382287.1-201ENST00000623954 586 ntBASIC17.73■□□□□ 0.43
RARBP10826 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.73■□□□□ 0.43
RARBP10826 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RARBP10826 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.73■□□□□ 0.43
RARBP10826 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RARBP10826 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARBP10826 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.72■□□□□ 0.43
RARBP10826 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RARBP10826 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.72■□□□□ 0.43
RARBP10826 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.72■□□□□ 0.43
RARBP10826 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.72■□□□□ 0.43
RARBP10826 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms