Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 PRAL-201ENST00000624952 3286 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SFTPBP07988 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SFTPBP07988 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SFTPBP07988 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.94□□□□□ -0.18
SFTPBP07988 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 AC073347.1-201ENST00000421633 2643 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 RPS8P6-201ENST00000426177 609 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 PDPK2P-202ENST00000562415 1191 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 AC023141.13-201ENST00000604991 943 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 AC112504.1-201ENST00000623415 1841 ntBASIC13.94□□□□□ -0.18
SFTPBP07988 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.94□□□□□ -0.18
SFTPBP07988 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SFTPBP07988 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.93□□□□□ -0.18
SFTPBP07988 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.93□□□□□ -0.18
SFTPBP07988 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SFTPBP07988 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.93□□□□□ -0.18
SFTPBP07988 AC007064.4-201ENST00000637740 555 ntBASIC13.93□□□□□ -0.18
SFTPBP07988 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SFTPBP07988 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SFTPBP07988 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SFTPBP07988 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 U82695.1-201ENST00000635752 1889 ntBASIC13.93□□□□□ -0.18
SFTPBP07988 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SFTPBP07988 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.93□□□□□ -0.18
SFTPBP07988 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SFTPBP07988 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms