Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
TCRAP04437 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRAP04437 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TCRAP04437 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 AC126365.1-201ENST00000578585 1514 ntBASIC12.17□□□□□ -0.46
TCRAP04437 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRAP04437 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRAP04437 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.17□□□□□ -0.46
TCRAP04437 AL031432.2-201ENST00000566714 459 ntBASIC12.17□□□□□ -0.46
TCRAP04437 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 AL928711.1-201ENST00000570165 459 ntBASIC12.17□□□□□ -0.46
TCRAP04437 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.17□□□□□ -0.46
TCRAP04437 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRAP04437 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRAP04437 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TCRAP04437 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRAP04437 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TCRAP04437 KRT8P44-201ENST00000441609 1350 ntBASIC12.17□□□□□ -0.46
TCRAP04437 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TCRAP04437 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 AC009090.5-201ENST00000624886 2285 ntBASIC12.16□□□□□ -0.46
TCRAP04437 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
TCRAP04437 KRT18P34-201ENST00000488218 1270 ntBASIC12.16□□□□□ -0.46
TCRAP04437 KRT18P31-201ENST00000506277 1292 ntBASIC12.16□□□□□ -0.46
TCRAP04437 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRAP04437 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRAP04437 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.16□□□□□ -0.46
TCRAP04437 REXO1L6P-202ENST00000619970 1078 ntBASIC12.16□□□□□ -0.46
TCRAP04437 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 MROH4P-201ENST00000431302 1578 ntBASIC12.16□□□□□ -0.46
TCRAP04437 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRAP04437 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms