Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SIX6O95475 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SIX6O95475 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 AC027601.5-201ENST00000624065 2482 ntBASIC13.39□□□□□ -0.27
SIX6O95475 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
SIX6O95475 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SIX6O95475 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.39□□□□□ -0.27
SIX6O95475 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.39□□□□□ -0.27
SIX6O95475 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 AC011558.1-201ENST00000623459 338 ntBASIC13.39□□□□□ -0.27
SIX6O95475 AL031432.5-201ENST00000641059 760 ntBASIC13.39□□□□□ -0.27
SIX6O95475 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.39□□□□□ -0.27
SIX6O95475 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SIX6O95475 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SIX6O95475 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SIX6O95475 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SIX6O95475 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 REXO1L2P-201ENST00000425429 2069 ntBASIC13.38□□□□□ -0.27
SIX6O95475 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.38□□□□□ -0.27
SIX6O95475 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.38□□□□□ -0.27
SIX6O95475 FAM201B-201ENST00000458407 597 ntBASIC13.38□□□□□ -0.27
SIX6O95475 COX11P1-201ENST00000489116 835 ntBASIC13.38□□□□□ -0.27
SIX6O95475 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.38□□□□□ -0.27
SIX6O95475 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SIX6O95475 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SIX6O95475 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SIX6O95475 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 AC126365.1-201ENST00000578585 1514 ntBASIC13.38□□□□□ -0.27
SIX6O95475 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.38□□□□□ -0.27
SIX6O95475 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SIX6O95475 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
SIX6O95475 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms