Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.64■□□□□ 0.9
LTN1O94822 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.64■□□□□ 0.9
LTN1O94822 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.64■□□□□ 0.9
LTN1O94822 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
LTN1O94822 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LTN1O94822 FZD10-202ENST00000539839 3282 ntBASIC20.64■□□□□ 0.9
LTN1O94822 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LTN1O94822 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
LTN1O94822 AD000864.1-201ENST00000624076 2295 ntBASIC20.64■□□□□ 0.89
LTN1O94822 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LTN1O94822 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LTN1O94822 AL354877.1-201ENST00000424412 413 ntBASIC20.64■□□□□ 0.89
LTN1O94822 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.64■□□□□ 0.89
LTN1O94822 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.64■□□□□ 0.89
LTN1O94822 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.64■□□□□ 0.89
LTN1O94822 PPY2P-201ENST00000582808 702 ntBASIC20.64■□□□□ 0.89
LTN1O94822 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 AC132938.4-201ENST00000623835 848 ntBASIC20.64■□□□□ 0.89
LTN1O94822 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTN1O94822 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 AC104457.1-201ENST00000401024 814 ntBASIC20.63■□□□□ 0.89
LTN1O94822 AC004066.1-201ENST00000502488 802 ntBASIC20.63■□□□□ 0.89
LTN1O94822 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.63■□□□□ 0.89
LTN1O94822 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.63■□□□□ 0.89
LTN1O94822 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
LTN1O94822 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.63■□□□□ 0.89
LTN1O94822 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LTN1O94822 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.63■□□□□ 0.89
LTN1O94822 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTN1O94822 AL662844.4-201ENST00000606367 2838 ntBASIC20.63■□□□□ 0.89
LTN1O94822 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LTN1O94822 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.62■□□□□ 0.89
LTN1O94822 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.62■□□□□ 0.89
LTN1O94822 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 SAMD11P1-201ENST00000571429 661 ntBASIC20.62■□□□□ 0.89
LTN1O94822 ENPP7P14-201ENST00000621765 1040 ntBASIC20.62■□□□□ 0.89
LTN1O94822 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LTN1O94822 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.62■□□□□ 0.89
LTN1O94822 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LTN1O94822 RNA5SP423-201ENST00000517127 109 ntBASIC20.62■□□□□ 0.89
LTN1O94822 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.62■□□□□ 0.89
LTN1O94822 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTN1O94822 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.62■□□□□ 0.89
LTN1O94822 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
LTN1O94822 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LTN1O94822 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 AC024909.3-201ENST00000611513 2257 ntBASIC20.61■□□□□ 0.89
LTN1O94822 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.61■□□□□ 0.89
LTN1O94822 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.61■□□□□ 0.89
LTN1O94822 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.61■□□□□ 0.89
LTN1O94822 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.61■□□□□ 0.89
LTN1O94822 CHMP4BP1-201ENST00000556017 588 ntBASIC20.61■□□□□ 0.89
LTN1O94822 RN7SL48P-201ENST00000579283 293 ntBASIC20.61■□□□□ 0.89
LTN1O94822 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LTN1O94822 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.61■□□□□ 0.89
LTN1O94822 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms