Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 MIR661-201ENST00000384842 89 ntBASIC16.82■□□□□ 0.28
CILPO75339 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.82■□□□□ 0.28
CILPO75339 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.82■□□□□ 0.28
CILPO75339 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.82■□□□□ 0.28
CILPO75339 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CILPO75339 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.82■□□□□ 0.28
CILPO75339 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
CILPO75339 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.82■□□□□ 0.28
CILPO75339 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.82■□□□□ 0.28
CILPO75339 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CILPO75339 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CILPO75339 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CILPO75339 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CILPO75339 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
CILPO75339 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 AC015922.1-201ENST00000421102 1152 ntBASIC16.81■□□□□ 0.28
CILPO75339 TSPY16P-201ENST00000449843 468 ntBASIC16.81■□□□□ 0.28
CILPO75339 AL589987.1-201ENST00000453380 819 ntBASIC16.81■□□□□ 0.28
CILPO75339 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.81■□□□□ 0.28
CILPO75339 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.81■□□□□ 0.28
CILPO75339 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.81■□□□□ 0.28
CILPO75339 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CILPO75339 AC104794.3-201ENST00000566840 1248 ntBASIC16.81■□□□□ 0.28
CILPO75339 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 SRD5A3P1-201ENST00000603021 949 ntBASIC16.81■□□□□ 0.28
CILPO75339 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.81■□□□□ 0.28
CILPO75339 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.81■□□□□ 0.28
CILPO75339 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.81■□□□□ 0.28
CILPO75339 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.81■□□□□ 0.28
CILPO75339 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.81■□□□□ 0.28
CILPO75339 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.81■□□□□ 0.28
CILPO75339 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CILPO75339 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
CILPO75339 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.8■□□□□ 0.28
CILPO75339 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.8■□□□□ 0.28
CILPO75339 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CILPO75339 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.8■□□□□ 0.28
CILPO75339 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.8■□□□□ 0.28
CILPO75339 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CILPO75339 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CILPO75339 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms