Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 SPCS2P4-201ENST00000436160 681 ntBASIC14.19□□□□□ -0.14
SGCEO43556 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SGCEO43556 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 KRT8P23-201ENST00000560090 1207 ntBASIC14.19□□□□□ -0.14
SGCEO43556 MIR3687-2-201ENST00000577708 61 ntBASIC14.19□□□□□ -0.14
SGCEO43556 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.19□□□□□ -0.14
SGCEO43556 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 MIR3687-1-201ENST00000614492 61 ntBASIC14.19□□□□□ -0.14
SGCEO43556 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SGCEO43556 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.19□□□□□ -0.14
SGCEO43556 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.19□□□□□ -0.14
SGCEO43556 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SGCEO43556 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SGCEO43556 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 BX842568.4-201ENST00000421222 227 ntBASIC14.18□□□□□ -0.14
SGCEO43556 AC142381.1-201ENST00000426099 345 ntBASIC14.18□□□□□ -0.14
SGCEO43556 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.18□□□□□ -0.14
SGCEO43556 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.18□□□□□ -0.14
SGCEO43556 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.18□□□□□ -0.14
SGCEO43556 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.18□□□□□ -0.14
SGCEO43556 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 SBF1P1-201ENST00000444527 5631 ntBASIC14.18□□□□□ -0.14
SGCEO43556 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 PAUPAR-201ENST00000630360 2965 ntBASIC14.18□□□□□ -0.14
SGCEO43556 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SGCEO43556 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SGCEO43556 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.18□□□□□ -0.14
SGCEO43556 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 FOXO1B-201ENST00000504678 1527 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms