Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.52■□□□□ 0.24
MSI1O43347 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.52■□□□□ 0.24
MSI1O43347 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.52■□□□□ 0.24
MSI1O43347 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.52■□□□□ 0.23
MSI1O43347 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
MSI1O43347 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSI1O43347 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
MSI1O43347 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
MSI1O43347 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.52■□□□□ 0.23
MSI1O43347 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 SPDYE19P-201ENST00000338590 713 ntBASIC16.51■□□□□ 0.23
MSI1O43347 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 DOC2GP-202ENST00000514950 1163 ntBASIC16.51■□□□□ 0.23
MSI1O43347 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.51■□□□□ 0.23
MSI1O43347 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.51■□□□□ 0.23
MSI1O43347 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 SRD5A3P1-201ENST00000603021 949 ntBASIC16.51■□□□□ 0.23
MSI1O43347 AC097359.3-201ENST00000603982 1210 ntBASIC16.51■□□□□ 0.23
MSI1O43347 AC004233.3-201ENST00000607794 1269 ntBASIC16.51■□□□□ 0.23
MSI1O43347 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.51■□□□□ 0.23
MSI1O43347 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MSI1O43347 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 AL607033.1-201ENST00000623900 1599 ntBASIC16.51■□□□□ 0.23
MSI1O43347 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
MSI1O43347 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSI1O43347 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 AC103702.1-201ENST00000548801 2630 ntBASIC16.5■□□□□ 0.23
MSI1O43347 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.5■□□□□ 0.23
MSI1O43347 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.5■□□□□ 0.23
MSI1O43347 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
MSI1O43347 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
MSI1O43347 KRT18P64-201ENST00000434946 1219 ntBASIC16.5■□□□□ 0.23
MSI1O43347 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
MSI1O43347 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
MSI1O43347 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.5■□□□□ 0.23
MSI1O43347 AF228730.6-201ENST00000641497 218 ntBASIC16.5■□□□□ 0.23
MSI1O43347 AC084121.3-201ENST00000641716 218 ntBASIC16.5■□□□□ 0.23
MSI1O43347 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSI1O43347 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MSI1O43347 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.5■□□□□ 0.23
MSI1O43347 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
MSI1O43347 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms