Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PFDN6O15212 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
PFDN6O15212 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 AC004987.2-201ENST00000395959 1148 ntBASIC16.03■□□□□ 0.16
PFDN6O15212 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.03■□□□□ 0.16
PFDN6O15212 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.03■□□□□ 0.16
PFDN6O15212 AC005237.2-201ENST00000434368 219 ntBASIC16.03■□□□□ 0.16
PFDN6O15212 AL139010.1-201ENST00000454878 894 ntBASIC16.03■□□□□ 0.16
PFDN6O15212 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.03■□□□□ 0.16
PFDN6O15212 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.03■□□□□ 0.16
PFDN6O15212 LINC01225-203ENST00000563550 1244 ntBASIC16.03■□□□□ 0.16
PFDN6O15212 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.03■□□□□ 0.16
PFDN6O15212 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN6O15212 AL365209.1-201ENST00000624418 6473 ntBASIC16.03■□□□□ 0.16
PFDN6O15212 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PFDN6O15212 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.02■□□□□ 0.16
PFDN6O15212 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PFDN6O15212 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.02■□□□□ 0.16
PFDN6O15212 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PFDN6O15212 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PFDN6O15212 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.02■□□□□ 0.16
PFDN6O15212 ALG1L5P-201ENST00000482043 771 ntBASIC16.02■□□□□ 0.16
PFDN6O15212 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PFDN6O15212 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.02■□□□□ 0.16
PFDN6O15212 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 AC084121.4-201ENST00000641598 221 ntBASIC16.02■□□□□ 0.16
PFDN6O15212 AF228730.8-201ENST00000642140 221 ntBASIC16.02■□□□□ 0.16
PFDN6O15212 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PFDN6O15212 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN6O15212 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PFDN6O15212 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
PFDN6O15212 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.02■□□□□ 0.15
PFDN6O15212 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
PFDN6O15212 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.15
PFDN6O15212 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.02■□□□□ 0.15
PFDN6O15212 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PFDN6O15212 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN6O15212 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN6O15212 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
PFDN6O15212 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN6O15212 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PFDN6O15212 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 FOXO1B-201ENST00000504678 1527 ntBASIC16.01■□□□□ 0.15
PFDN6O15212 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN6O15212 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PFDN6O15212 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PFDN6O15212 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
PFDN6O15212 BX842568.4-201ENST00000421222 227 ntBASIC16.01■□□□□ 0.15
PFDN6O15212 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms