Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HKR1-225ENST00000592168 566 ntTSL 4 BASIC26.61■■□□□ 1.85
CUX2O14529 BX539320.1-201ENST00000623759 877 ntBASIC26.61■■□□□ 1.85
CUX2O14529 AC068587.8-201ENST00000641239 219 ntBASIC26.61■■□□□ 1.85
CUX2O14529 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC26.61■■□□□ 1.85
CUX2O14529 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CUX2O14529 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CUX2O14529 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 TPM3P8-201ENST00000330554 643 ntBASIC26.6■■□□□ 1.85
CUX2O14529 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 SERBP1P2-201ENST00000436888 1164 ntBASIC26.6■■□□□ 1.85
CUX2O14529 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC26.6■■□□□ 1.85
CUX2O14529 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
CUX2O14529 LETM1P2-201ENST00000597330 2178 ntBASIC26.6■■□□□ 1.85
CUX2O14529 AC105137.3-201ENST00000617588 984 ntBASIC26.6■■□□□ 1.85
CUX2O14529 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC26.6■■□□□ 1.85
CUX2O14529 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CUX2O14529 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC26.59■■□□□ 1.85
CUX2O14529 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CUX2O14529 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC26.59■■□□□ 1.85
CUX2O14529 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.59■■□□□ 1.85
CUX2O14529 AC136604.1-201ENST00000418535 575 ntBASIC26.59■■□□□ 1.85
CUX2O14529 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC26.59■■□□□ 1.85
CUX2O14529 HCG27-204ENST00000424675 895 ntTSL 3 BASIC26.59■■□□□ 1.85
CUX2O14529 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC26.59■■□□□ 1.85
CUX2O14529 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC26.59■■□□□ 1.85
CUX2O14529 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC26.59■■□□□ 1.85
CUX2O14529 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC26.59■■□□□ 1.85
CUX2O14529 BANP-227ENST00000626016 2144 ntTSL 2 BASIC26.59■■□□□ 1.85
CUX2O14529 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC26.59■■□□□ 1.85
CUX2O14529 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CUX2O14529 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC26.58■■□□□ 1.85
CUX2O14529 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC26.58■■□□□ 1.85
CUX2O14529 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 RNU1-114P-201ENST00000365297 166 ntBASIC26.58■■□□□ 1.85
CUX2O14529 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC26.58■■□□□ 1.85
CUX2O14529 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC26.58■■□□□ 1.85
CUX2O14529 RPL18AP3-201ENST00000462885 528 ntBASIC26.58■■□□□ 1.85
CUX2O14529 AC130709.1-201ENST00000484779 1212 ntBASIC26.58■■□□□ 1.85
CUX2O14529 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC26.58■■□□□ 1.85
CUX2O14529 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC26.58■■□□□ 1.85
CUX2O14529 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC26.58■■□□□ 1.85
CUX2O14529 AL161773.1-201ENST00000624845 863 ntBASIC26.58■■□□□ 1.85
CUX2O14529 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC26.58■■□□□ 1.85
CUX2O14529 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CUX2O14529 GCK-202ENST00000345378 2421 ntTSL 2 BASIC26.58■■□□□ 1.85
CUX2O14529 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CUX2O14529 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC26.57■■□□□ 1.84
CUX2O14529 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC26.57■■□□□ 1.84
CUX2O14529 NHP2-202ENST00000314397 599 ntTSL 2 BASIC26.57■■□□□ 1.84
CUX2O14529 UROS-201ENST00000368774 744 ntTSL 2 BASIC26.57■■□□□ 1.84
CUX2O14529 BCAS2P2-201ENST00000425064 674 ntBASIC26.57■■□□□ 1.84
CUX2O14529 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC26.57■■□□□ 1.84
CUX2O14529 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 AP003171.2-201ENST00000528208 925 ntBASIC26.57■■□□□ 1.84
CUX2O14529 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CUX2O14529 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC26.57■■□□□ 1.84
CUX2O14529 AC004923.1-202ENST00000642106 209 ntBASIC26.57■■□□□ 1.84
CUX2O14529 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
CUX2O14529 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC26.57■■□□□ 1.84
CUX2O14529 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CUX2O14529 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC26.57■■□□□ 1.84
CUX2O14529 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC26.57■■□□□ 1.84
CUX2O14529 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CUX2O14529 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CUX2O14529 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CUX2O14529 FAM8A4P-201ENST00000435433 1213 ntBASIC26.56■■□□□ 1.84
CUX2O14529 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms