Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UPK2O00526 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.81□□□□□ -0.36
UPK2O00526 FAM58CP-201ENST00000435741 640 ntBASIC12.81□□□□□ -0.36
UPK2O00526 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 RN7SL589P-201ENST00000481268 310 ntBASIC12.81□□□□□ -0.36
UPK2O00526 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 AC120114.3-201ENST00000611923 658 ntBASIC12.81□□□□□ -0.36
UPK2O00526 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 AC092902.6-201ENST00000641783 218 ntBASIC12.81□□□□□ -0.36
UPK2O00526 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 AC018892.3-201ENST00000623986 2499 ntBASIC12.81□□□□□ -0.36
UPK2O00526 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 AC138035.3-201ENST00000622706 2791 ntBASIC12.81□□□□□ -0.36
UPK2O00526 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.8□□□□□ -0.36
UPK2O00526 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.8□□□□□ -0.36
UPK2O00526 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms