Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC196A0A1B0GTZ2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 MIR943-201ENST00000401286 94 ntBASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC097493.3-201ENST00000509725 367 ntBASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC097359.3-201ENST00000603982 1210 ntBASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 PAUPAR-201ENST00000630360 2965 ntBASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC196A0A1B0GTZ2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC196A0A1B0GTZ2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms