Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC004987.2-201ENST00000395959 1148 ntBASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 HLA-V-201ENST00000429037 534 ntBASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AC007967.4-201ENST00000614700 386 ntBASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB1Q9Y5F3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 AL139010.1-201ENST00000454878 894 ntBASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 AC008741.2-201ENST00000612792 3115 ntBASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 AC134407.2-201ENST00000625089 1978 ntBASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB1Q9Y5F3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms