Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 PMS2P2-201ENST00000425039 1128 ntBASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 AL138828.2-201ENST00000615812 383 ntBASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HDGFL3Q9Y3E1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
HDGFL3Q9Y3E1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HDGFL3Q9Y3E1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDGFL3Q9Y3E1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 AZGP1P1-201ENST00000411909 902 ntBASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 RPL37AP1-201ENST00000412502 279 ntBASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 TEX28P1-201ENST00000613479 1221 ntBASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 TEX28P2-201ENST00000617764 1221 ntBASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 AL033527.5-202ENST00000641632 1098 ntBASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDGFL3Q9Y3E1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 MIR943-201ENST00000401286 94 ntBASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 AC027369.6-201ENST00000525520 931 ntBASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms