Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 MIR3909-201ENST00000579518 119 ntBASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 U1.21-201ENST00000580816 167 ntBASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AL031055.1-201ENST00000606362 631 ntBASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 HMGA1P7-201ENST00000406908 502 ntBASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 AC148477.8-201ENST00000624298 468 ntBASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 AC016027.1-202ENST00000607927 1699 ntBASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB4Q9UN71 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 KRT126P-201ENST00000549467 1181 ntBASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 RN7SL510P-201ENST00000581311 263 ntBASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms