Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AGAP7P-201ENST00000582299 2062 ntBASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AGAP14-201ENST00000624701 2060 ntBASIC15.51■□□□□ 0.07
NDE1Q9NXR1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AC112693.3-201ENST00000624819 1983 ntBASIC15.51■□□□□ 0.07
NDE1Q9NXR1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TSSC2-201ENST00000450217 709 ntBASIC15.5■□□□□ 0.07
NDE1Q9NXR1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 AC074051.2-201ENST00000565115 352 ntBASIC15.5■□□□□ 0.07
NDE1Q9NXR1 MIR5100-201ENST00000579544 119 ntBASIC15.5■□□□□ 0.07
NDE1Q9NXR1 AC021097.1-201ENST00000607902 574 ntBASIC15.5■□□□□ 0.07
NDE1Q9NXR1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
NDE1Q9NXR1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 AC117489.1-201ENST00000625169 3217 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 C18orf15-201ENST00000623680 2534 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 AP001282.1-201ENST00000531301 1499 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 RCN1P1-201ENST00000400413 996 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 AC104819.1-201ENST00000504587 486 ntBASIC15.49■□□□□ 0.07
NDE1Q9NXR1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.49■□□□□ 0.07
NDE1Q9NXR1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms