Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 USP32P1-208ENST00000506594 1164 ntBASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 AC124283.3-201ENST00000570869 594 ntBASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 BTNL10-201ENST00000595971 695 ntBASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPHK2Q9NRA0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 AC120045.2-201ENST00000567334 178 ntBASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CROCCP1-201ENST00000426910 5675 ntBASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPHK2Q9NRA0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SPHK2Q9NRA0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 C1QBPP1-201ENST00000400117 770 ntBASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 VDAC1P7-201ENST00000462417 847 ntBASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 TDH-203ENST00000531764 1110 ntBASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 MIR5189-201ENST00000577370 114 ntBASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 AC233724.13-201ENST00000598383 410 ntBASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SPHK2Q9NRA0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms