Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SPDYE14P-201ENST00000442619 822 ntBASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AC098859.1-201ENST00000502915 1238 ntBASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AC026150.2-201ENST00000564693 1156 ntBASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 AL589702.1-201ENST00000641229 1509 ntBASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.36■□□□□ 0.05
NECTIN3Q9NQS3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 POU5F1P6-201ENST00000466990 990 ntBASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 AP001059.3-201ENST00000619053 235 ntBASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.35■□□□□ 0.05
NECTIN3Q9NQS3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 RARRES2P9-201ENST00000565168 469 ntBASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms