Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TIMM17BP1-201ENST00000545713 516 ntBASIC16.5■□□□□ 0.23
HPS4Q9NQG7 RAB43P1-201ENST00000561790 589 ntBASIC16.5■□□□□ 0.23
HPS4Q9NQG7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS4Q9NQG7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CDC14C-201ENST00000428251 1719 ntBASIC16.49■□□□□ 0.23
HPS4Q9NQG7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 RARRES2P5-201ENST00000564013 466 ntBASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 TMEM261P1-201ENST00000604899 340 ntBASIC16.49■□□□□ 0.23
HPS4Q9NQG7 LINC01115-203ENST00000606068 577 ntBASIC16.49■□□□□ 0.23
HPS4Q9NQG7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS4Q9NQG7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 Z97205.2-201ENST00000564697 1639 ntBASIC16.48■□□□□ 0.23
HPS4Q9NQG7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms