Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 AC090616.6-203ENST00000579186 1945 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 AC142381.1-201ENST00000426099 345 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 FAM58CP-201ENST00000435741 640 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 RNA5SP410-201ENST00000516285 106 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 AC006058.4-201ENST00000624016 1670 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 AC018892.3-201ENST00000623986 2499 ntBASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRTM1Q9HBL6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 RN7SL589P-201ENST00000481268 310 ntBASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 AL109954.1-202ENST00000564051 2148 ntBASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 AC006486.2-201ENST00000624246 2199 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms