Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 FAM8A3P-201ENST00000427218 844 ntBASIC18.75■□□□□ 0.59
RNF41Q9H4P4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 AC004461.2-201ENST00000629517 803 ntBASIC18.75■□□□□ 0.59
RNF41Q9H4P4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 AL607033.1-201ENST00000623900 1599 ntBASIC18.75■□□□□ 0.59
RNF41Q9H4P4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF41Q9H4P4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 AP005117.1-202ENST00000581724 1908 ntBASIC18.74■□□□□ 0.59
RNF41Q9H4P4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 AC018695.7-201ENST00000624587 2492 ntBASIC18.74■□□□□ 0.59
RNF41Q9H4P4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 AC074338.1-201ENST00000416825 156 ntBASIC18.74■□□□□ 0.59
RNF41Q9H4P4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 AC092337.1-201ENST00000568699 1129 ntBASIC18.74■□□□□ 0.59
RNF41Q9H4P4 MIR4745-201ENST00000577608 62 ntBASIC18.74■□□□□ 0.59
RNF41Q9H4P4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RNF41Q9H4P4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 RPL13P2-201ENST00000440687 659 ntBASIC18.73■□□□□ 0.59
RNF41Q9H4P4 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 SLED1-202ENST00000512051 380 ntBASIC18.73■□□□□ 0.59
RNF41Q9H4P4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 TIMM17BP1-201ENST00000545713 516 ntBASIC18.73■□□□□ 0.59
RNF41Q9H4P4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 AC092364.2-202ENST00000597012 1073 ntBASIC18.73■□□□□ 0.59
RNF41Q9H4P4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF41Q9H4P4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF41Q9H4P4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms