Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 AC090616.6-203ENST00000579186 1945 ntBASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 KRT18P28-201ENST00000453838 1332 ntBASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 DNAJB3-202ENST00000449667 1266 ntBASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 AC069335.1-201ENST00000489972 472 ntBASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 AC024267.1-201ENST00000582320 895 ntBASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
UPF3BQ9BZI7 REXO1L1P-202ENST00000608646 1974 ntBASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 FAM220BP-201ENST00000377689 816 ntBASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 AC243562.2-201ENST00000561247 970 ntBASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPF3BQ9BZI7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 SLC25A39P2-201ENST00000537614 270 ntBASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.03■□□□□ 0.64
UPF3BQ9BZI7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms