Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 DEFT1P-201ENST00000453425 496 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 OR7E14P-202ENST00000530490 1290 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AP001282.1-201ENST00000531301 1499 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC012640.2-201ENST00000561606 901 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC024267.5-201ENST00000579154 599 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 MIR4313-201ENST00000580760 101 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 MIR4321-201ENST00000592276 80 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 CLEC4GP1-201ENST00000596555 870 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL356488.2-201ENST00000602755 427 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL365330.1-201ENST00000607459 531 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL121772.3-201ENST00000610840 674 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC093458.2-201ENST00000623150 629 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL390755.1-201ENST00000623716 2027 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AC106730.3-201ENST00000624568 641 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 AL589702.1-201ENST00000641229 1509 ntBASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
KRTAP3-1Q9BYR8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 AP002414.3-201ENST00000589352 1468 ntBASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC8.15□□□□□ -1.1
KRTAP3-1Q9BYR8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms