Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 STK19B-204ENST00000512515 211 ntBASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 PCDHA3-202ENST00000532566 4594 ntBASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AL109954.1-202ENST00000564051 2148 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MYO15B-237ENST00000642007 4893 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 SLC25A1P3-201ENST00000395415 828 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 FGFR3P6-201ENST00000457012 610 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 RNPS1P1-201ENST00000507437 918 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AP001269.4-201ENST00000609611 512 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AD001527.2-201ENST00000622994 785 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 AP005117.1-201ENST00000584346 1413 ntBASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFAF3Q9BU61 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms