Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 PCGF3-213ENST00000620529 1899 ntBASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 HLA-H-201ENST00000383620 1096 ntBASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 AC018529.1-201ENST00000613063 361 ntBASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
PCGF1Q9BSM1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ALOX12P2-203ENST00000570921 1945 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TREML5P-201ENST00000421694 576 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC069120.2-201ENST00000524091 540 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC051619.7-201ENST00000568314 623 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AC005498.2-205ENST00000593218 784 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AP002414.2-201ENST00000591780 3365 ntBASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms