Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.28■□□□□ 0.52
ARID3AQ99856 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 AC116407.3-201ENST00000623905 1129 ntBASIC18.28■□□□□ 0.52
ARID3AQ99856 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.28■□□□□ 0.52
ARID3AQ99856 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
ARID3AQ99856 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARID3AQ99856 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARID3AQ99856 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
ARID3AQ99856 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.27■□□□□ 0.52
ARID3AQ99856 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.27■□□□□ 0.52
ARID3AQ99856 AC098831.1-202ENST00000438821 336 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 AC087163.2-201ENST00000457299 853 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 SLC25A6P2-201ENST00000497974 877 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 AC079776.4-201ENST00000511039 504 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 AL662844.1-201ENST00000546340 181 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ARID3AQ99856 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.27■□□□□ 0.52
ARID3AQ99856 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ARID3AQ99856 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
ARID3AQ99856 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARID3AQ99856 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.27■□□□□ 0.52
ARID3AQ99856 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ARID3AQ99856 AC006058.4-201ENST00000624016 1670 ntBASIC18.27■□□□□ 0.52
ARID3AQ99856 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARID3AQ99856 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARID3AQ99856 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.27■□□□□ 0.51
ARID3AQ99856 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARID3AQ99856 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARID3AQ99856 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ARID3AQ99856 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.26■□□□□ 0.51
ARID3AQ99856 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ARID3AQ99856 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARID3AQ99856 RPS2P28-201ENST00000314255 741 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms