Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC6Q99741 AC006033.1-201ENST00000440505 426 ntBASIC15.34■□□□□ 0.05
CDC6Q99741 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC6Q99741 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.34■□□□□ 0.05
CDC6Q99741 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC6Q99741 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CDC6Q99741 CLUHP6-201ENST00000580789 941 ntBASIC15.34■□□□□ 0.05
CDC6Q99741 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC6Q99741 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC6Q99741 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDC6Q99741 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC6Q99741 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CDC6Q99741 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.33■□□□□ 0.05
CDC6Q99741 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.33■□□□□ 0.05
CDC6Q99741 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.33■□□□□ 0.05
CDC6Q99741 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.33■□□□□ 0.05
CDC6Q99741 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDC6Q99741 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC6Q99741 AC074338.1-201ENST00000416825 156 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 AC026954.1-201ENST00000429771 1293 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 AC093433.1-201ENST00000458048 571 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 POU5F1P6-201ENST00000466990 990 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 AP001258.2-201ENST00000529891 490 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 KRT90P-201ENST00000549264 1064 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC6Q99741 AL022328.3-201ENST00000607943 679 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 AC009542.2-202ENST00000619004 1067 ntBASIC15.33■□□□□ 0.04
CDC6Q99741 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CDC6Q99741 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC6Q99741 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDC6Q99741 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC6Q99741 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC6Q99741 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDC6Q99741 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC6Q99741 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC6Q99741 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC6Q99741 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC6Q99741 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms