Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD9AQ99638 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAD9AQ99638 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 FNTAP2-201ENST00000430308 634 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 HOMER2P2-201ENST00000451621 847 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.86■□□□□ 0.29
RAD9AQ99638 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC079328.1-201ENST00000560358 952 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.86■□□□□ 0.29
RAD9AQ99638 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC105020.1-201ENST00000435356 2205 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAD9AQ99638 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD9AQ99638 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC134407.2-201ENST00000625089 1978 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD9AQ99638 AC005915.1-201ENST00000624912 2018 ntBASIC16.86■□□□□ 0.29
RAD9AQ99638 PCDHA12-202ENST00000613593 2588 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 AL662890.1-201ENST00000396818 632 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 MTX1P1-201ENST00000440904 838 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 BX284668.4-201ENST00000453917 508 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 RNA5SP486-201ENST00000515961 83 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 AC020914.3-201ENST00000594712 304 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
RAD9AQ99638 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD9AQ99638 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 AC015818.8-201ENST00000587907 1519 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RAD9AQ99638 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD9AQ99638 AL138709.1-201ENST00000614840 1693 ntBASIC16.85■□□□□ 0.29
RAD9AQ99638 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms