Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NCLNQ969V3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
NCLNQ969V3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.56■□□□□ 0.08
NCLNQ969V3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.56■□□□□ 0.08
NCLNQ969V3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.56■□□□□ 0.08
NCLNQ969V3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 AC099522.2-201ENST00000607001 744 ntBASIC15.56■□□□□ 0.08
NCLNQ969V3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NCLNQ969V3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.56■□□□□ 0.08
NCLNQ969V3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCLNQ969V3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NCLNQ969V3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
NCLNQ969V3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NCLNQ969V3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
NCLNQ969V3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 PMS2P4-201ENST00000412466 1052 ntBASIC15.55■□□□□ 0.08
NCLNQ969V3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.55■□□□□ 0.08
NCLNQ969V3 AC109635.5-201ENST00000533593 962 ntBASIC15.55■□□□□ 0.08
NCLNQ969V3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.55■□□□□ 0.08
NCLNQ969V3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NCLNQ969V3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.55■□□□□ 0.08
NCLNQ969V3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCLNQ969V3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.54■□□□□ 0.08
NCLNQ969V3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NCLNQ969V3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms