Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 RPL13AP20-201ENST00000459725 609 ntBASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AC099548.2-209ENST00000480264 625 ntBASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AP001582.1-201ENST00000525856 295 ntBASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AC008687.7-202ENST00000637404 953 ntBASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 AC006449.6-201ENST00000612330 2296 ntBASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RAPGEF4Q8WZA2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 BCYRN1-201ENST00000418539 200 ntBASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 DUX4L45-201ENST00000566406 1057 ntBASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 RN7SL560P-201ENST00000577943 264 ntBASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 AC103810.3-201ENST00000583567 96 ntBASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAPGEF4Q8WZA2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 AL133267.1-201ENST00000398220 340 ntBASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 AC015910.1-201ENST00000579400 975 ntBASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 AC084346.2-201ENST00000607097 949 ntBASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAPGEF4Q8WZA2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms