Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TOB2P1-201ENST00000469761 992 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 AC063952.2-201ENST00000498792 1227 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TPSP2-201ENST00000561760 610 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 AC139887.3-201ENST00000568585 713 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 AC091076.1-201ENST00000610741 619 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 AL139288.1-201ENST00000623748 933 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 AC117489.1-201ENST00000625169 3217 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 FAM8A3P-201ENST00000427218 844 ntBASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 AC004706.3-202ENST00000621574 984 ntBASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 AC097376.2-205ENST00000610159 5334 ntBASIC13.66□□□□□ -0.22
SMIM4Q8WVI0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 AC012569.1-201ENST00000591191 1524 ntBASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 BX640514.1-201ENST00000583223 1918 ntBASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM4Q8WVI0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms