Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AP3S2-216ENST00000617003 1561 ntBASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PSMC1P2-201ENST00000423961 1204 ntBASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC051619.7-201ENST00000568314 623 ntBASIC16.23■□□□□ 0.19
PTCD2Q8WV60 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 PAUPAR-201ENST00000630360 2965 ntBASIC16.23■□□□□ 0.19
PTCD2Q8WV60 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCD2Q8WV60 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.22■□□□□ 0.19
PTCD2Q8WV60 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 AC005972.3-201ENST00000606304 481 ntBASIC16.22■□□□□ 0.19
PTCD2Q8WV60 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCD2Q8WV60 TUBB3P1-201ENST00000405796 1332 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms