Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AL450472.2-201ENST00000603663 1156 ntBASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AC093512.1-201ENST00000617969 520 ntBASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 HYMAI-201ENST00000635591 3347 ntBASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC148Q8NFR7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 TEX28P1-201ENST00000613479 1221 ntBASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 TEX28P2-201ENST00000617764 1221 ntBASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 AC103702.1-201ENST00000548801 2630 ntBASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 FLJ16779-201ENST00000612722 7638 ntBASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC148Q8NFR7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 LINC00554-201ENST00000564841 3011 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AC092580.3-201ENST00000430932 139 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 IGHV3-42-201ENST00000520410 361 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AC027369.6-201ENST00000525520 931 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 DUX4L27-201ENST00000554796 1261 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 MIR6069-201ENST00000620069 79 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AC132872.4-202ENST00000622924 2756 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AL513477.1-201ENST00000602865 2407 ntBASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC148Q8NFR7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 AZGP1P1-201ENST00000411909 902 ntBASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 PHKG1P2-201ENST00000457537 863 ntBASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms