Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 RNA5SP410-201ENST00000516285 106 ntBASIC16.56■□□□□ 0.24
TTC13Q8NBP0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 SLC25A1P1-201ENST00000528351 927 ntBASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AC105250.1-201ENST00000509378 2057 ntBASIC16.56■□□□□ 0.24
TTC13Q8NBP0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.56■□□□□ 0.24
TTC13Q8NBP0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 AC023157.3-201ENST00000619086 2088 ntBASIC16.55■□□□□ 0.24
TTC13Q8NBP0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 RPS8P6-201ENST00000426177 609 ntBASIC16.55■□□□□ 0.24
TTC13Q8NBP0 FAM58CP-201ENST00000435741 640 ntBASIC16.55■□□□□ 0.24
TTC13Q8NBP0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 AC092183.1-201ENST00000469884 875 ntBASIC16.55■□□□□ 0.24
TTC13Q8NBP0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC13Q8NBP0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 MIR346-201ENST00000362234 95 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 HLA-H-201ENST00000383620 1096 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 AL691447.1-201ENST00000419456 387 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 KRT8P23-201ENST00000560090 1207 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 AC092902.6-201ENST00000641783 218 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.54■□□□□ 0.24
TTC13Q8NBP0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC13Q8NBP0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms