Protein–RNA interactions for Protein: Q8N3U4

STAG2, Cohesin subunit SA-2, humanhuman

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG2Q8N3U4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 COX20P2-201ENST00000452636 358 ntBASIC18.37■□□□□ 0.53
STAG2Q8N3U4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 TPRX2P-201ENST00000535362 881 ntBASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SPDYE22P-201ENST00000582158 798 ntBASIC18.37■□□□□ 0.53
STAG2Q8N3U4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
STAG2Q8N3U4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 MEIS3P1-201ENST00000495167 958 ntBASIC18.36■□□□□ 0.53
STAG2Q8N3U4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 TIMM17BP1-201ENST00000545713 516 ntBASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 AL391069.4-201ENST00000609583 481 ntBASIC18.36■□□□□ 0.53
STAG2Q8N3U4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG2Q8N3U4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.35■□□□□ 0.53
STAG2Q8N3U4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 AC015922.1-201ENST00000421102 1152 ntBASIC18.35■□□□□ 0.53
STAG2Q8N3U4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.35■□□□□ 0.53
STAG2Q8N3U4 AL662799.1-202ENST00000614205 422 ntBASIC18.35■□□□□ 0.53
STAG2Q8N3U4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG2Q8N3U4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms